GHRP-6
Growth Hormone Releasing Peptide-6, Growth hormone-releasing hexapeptide, His-D-Trp-Ala-Trp-D-Phe-Lys-NH2
Ultra-Fast Computation of Excited-States Spectra for Large Systems: Ultraviolet and Fluorescence Spectra of Proteins.
Liu. Yonggang Y; Xu. Jianjie J; Han. Li L; Liu. Qiangqiang Q; Yang. Yunfan Y; Li. Zeren Z; Lu. Zhongyuan Z; Zhang. Hang H; Guo. Tengxiao T; Liu. Qiao Q
Key Findings
- Error
Practical Outcomes
- Error
Summary
Error: Timeout.
Abstract
A workable approach named xTB-sTDDFT was selected to investigate the excited-state spectra of oxytocin (135 atoms), GHRP-6 (120 atoms) and insulin (793 atoms). Three different Hartree-Fock components functionals (wB97XD3: 51%, LC-BLYP: 53%, wB97X: 57%) were used to calculate the excitation spectra, and the results calculated by wB97XD3 functional well agree with the experiments. It's a deep impression that computed time cost reduced by more than 80%. For polypeptide (oxytocin and GHRP-6), both UV and fluorescence spectra were obtained, and the errors between the calculated and experimental values approximately were 20 nm. For Insulin, the errors are within 15 nm. UV spectrum peak is λ<sub>cal</sub> = 262 nm (λ<sub>exp</sub> = 277 nm, Δλ = 15 nm), and fluorescence spectrum peak is λ<sub>cal</sub> = 294 nm (λ<sub>exp</sub> = 304 nm, Δλ = 10 nm). In summary, a suitable theoretical model is established to ultra-fast calculate the electronic excitation spectra of large systems, such as proteins and biomacromolecules, with good calculation accuracy, fast calculation speed and low cost.
Study Information
pubmed
2020
2020-11-13T00:00:00.000Z
10.1007/s12539-020-00402-7
2
26