Deciphering protein-DNA interactions of <i>KISS1</i> with transcription factors through molecular docking, molecular dynamics simulations, and gene expression analysis.
Shah. Hetvi H; Pillai. Pranav P; Buch. Lipi L; Ramachandran. A V AV; Pandya. Parth P
Key Findings
- KISS1 binds most strongly to the transcription factor CDX2, with other notable interactions to HDAC2, GATA2, NMYC, SP1, and FLI1.
- Molecular dynamics showed stable complexes for SP1, NMYC, and CDX2, suggesting reliable binding.
- In tripleânegative breastâcancer cells, kisspeptinâ10 (IC50 â 100âŻnM) increased SP1, NMYC, CDX2, GATA2 and decreased FLI1 and HDAC2 expression.
Practical Outcomes
- At present, the findings are purely laboratoryâbased and do not translate into a safe or effective protocol for human use. Biohackers should view this as earlyâstage cancerâresearch rather than a supplement or longevity strategy, and await further clinical studies before considering any application.
Summary
Scientists studied how the protein KISS1 (and its short piece kisspeptinâ10) interacts with DNAâbinding proteins that drive cancer spread. In lab breastâcancer cells, kisspeptinâ10 at about 100âŻnM changed the activity of several transcription factors, boosting some that may suppress metastasis and lowering others that promote it. The work shows a possible antiâcancer effect but does not give any humanâusable dosing or safety info.
Abstract
Metastasis is a key hallmark of cancer aggressiveness, particularly in triple-negative breast cancer (TNBC), which lacks effective targeted therapies. Kisspeptin-1 (KISS1), a known metastasis suppressor is emerging as a potential therapeutic modulator. This study investigates the structural and regulatory interactions between <i>KISS1</i> and key transcription factors (TFs) involved in metastasis: SP1, CDX2, FLI1, GATA2, NMYC, and HDAC2. TFs were identified <i>via</i> TFLink, modelled using SWISS-MODEL, and docked with <i>KISS1</i>-DNA using HADDOCK. CDX2 showed the strongest binding (HADDOCK score: -144.2; buried surface area: 2526.5 Å<sup>2</sup>), followed by HDAC2, GATA2, NMYC, SP1, and FLI1. Molecular dynamics simulations (150 ns) revealed stable complexes for SP1, NMYC, and CDX2 with low RMSD (2.1-2.7 Å), compact Rg (∼21.0 Å), and stable hydrogen bonding (5-9 bonds). In contrast, FLI1 and GATA2 showed greater flexibility and unstable interactions. Experimental validation in MDA-MB-231 cells treated with Kisspeptin-10 (IC<sub>50</sub>: 100.21 nM) showed upregulation of SP1, NMYC, CDX2, and GATA2, and downregulation of FLI1 and HDAC2. These findings suggest KISS1 selectively modulates transcriptional activity toward anti-metastatic signaling. Overall, <i>KISS1</i> demonstrates strong potential as a transcriptional regulator and therapeutic agent against TNBC metastasis.
Study Information
pubmed
2025
2025-09-05T00:00:00.000Z
10.1080/07391102.2025.2553344
29