Menu
Peptide Database
Results
No peptides found
Featured

Use search to browse all 100+ peptides

Thymosin-beta-4-fragment

Ac-SDKP, Goralatide, Seraspenide

Quick Stats
Studies 83
Trials 3
Score 2
2000 pubmed

Structural requirements for thymosin beta4 in its contact with actin. An NMR-analysis of thymosin beta4 mutants in solution and correlation with their biological activity.

Simenel. C C; Van Troys. M M; Vandekerckhove. J J; Ampe. C C; Delepierre. M M

Key Findings

  • Thymosin‑beta‑4 has two key helices: helix I (residues 5‑16) and helix II (31‑39).
  • Mutations in helix I or the nearby LKKTET segment alter the peptide’s helical structure and reduce its biological activity.
  • Extending helix I beyond its normal end (into the LK‑segment) abolishes activity, highlighting the need for precise helix termination.

Practical Outcomes

  • When using thymosin‑beta‑4 or its fragments, keep the peptide length to the natural 5‑16 region for the first helix; avoid adding extra amino acids that extend this helix, as it will likely diminish effectiveness.

Summary

The study shows that the shape of thymosin‑beta‑4, especially a short helix near its middle, is crucial for it to bind actin properly. Changing the length or sequence of this helix can weaken the peptide’s activity, meaning only the natural‑sized version works best.

Abstract

We examined the conformational preferences of mutants of thymosin beta4, an actin monomer sequestering protein by NMR spectroscopy in 60% (v/v) trifluoroethanol. Under these conditions, the wild-type thymosin beta4 conformation consists of an alpha-helix (helix I) extending from residues 5-16 with a more stable fragment from lysine 11 to lysine 16 and a second alpha-helix (helix II) encompassing residues 31-39. The point mutations studied here are located in helix I or in the LKKTET segment (residues 17-22) that form the two main entities of interaction with the actin molecule. The alpha-1H conformational shifts allow us to investigate the helicity of the polypeptides at the residue level and to correlate these structures with their biological activity. We determine that an extension of helix I at its C-terminal end over the LKK-segment results in loss of activity. The correct termination of this helix is connected to a specific orientation of the polypeptide essential for a cooperative action of the thymosin beta4 binding entities required for full activity.

Study Information

Provider

pubmed

Year

2000

DOI

10.1046/j.1432-1327.2000.01380.x